Package index • RstoxData

All functions
`AcousticData`	StoX data type AcousticData
`AddToStoxBiotic()`	Add variables to StoxBioticData from BioticData
`BioticData`	StoX data type BioticData
`CompensateEffectiveTowDistanceForFishingDepthCount()`	Divide EffectiveTowDistance by fishingdepthcount for NMDBiotic data
`ConvertAcoustic()`	Convert AcousticData
`ConvertBiotic()`	Convert BioticData
`ConvertStoxAcoustic()`	Convert StoxAcousticData
`ConvertStoxBiotic()`	Convert StoxBioticData
`CopyAcoustic()`	Copy a variable of AcousticData
`CopyBiotic()`	Copy a variable of BioticData
`CopyICESAcoustic()`	Copy a variable of ICESAcousticData
`CopyICESBiotic()`	Copy a variable of ICESBioticData
`CopyICESDatras()`	Copy a variable of ICESDatrasData
`CopyICESDatsusc()`	Copy a variable of ICESDatrasData
`CopyLanding()`	Copy a variable of LandingData
`CopyStoxAcoustic()`	Copy a variable of StoxAcousticData
`CopyStoxBiotic()`	Copy a variable of StoxBioticData
`CopyStoxLanding()`	Copy a variable of StoxLandingData
`DataTypes`	StoX data types of the RstoxData package
`DefineTranslation()`	Define translation
`FilterAcoustic()`	Filter (raw) Acoustic data
`FilterBiotic()`	Filter (raw) Biotic data
`FilterICESAcoustic()`	Filter ICESAcoustic data
`FilterICESBiotic()`	Filter ICESBiotic data
`FilterICESDatras()`	Filter ICESDatras data
`FilterICESDatsusc()`	Filter ICESDatsusc data
`FilterLanding()`	Filter LandingData
`FilterStoxAcoustic()`	Filter StoxAcoustic data
`FilterStoxBiotic()`	Filter StoxBiotic data
`FilterStoxLanding()`	Filter StoxLanding data
`ICESAcoustic()`	Convert AcousticData to ICESAcousticData.
`ICESAcousticData`	StoX data type ICESAcousticData
`ICESBiotic()`	Convert BioticData to ICESBiotic format
`ICESBioticData`	StoX data type ICESBioticData
`ICESDatras()`	Convert BioticData to ICESDatras format
`ICESDatrasData`	StoX data type ICESDatrasData
`ICESDatsusc()`	Convert BioticData to ICESDatsuSC format
`ICESDatsuscData`	StoX data type ICESDatsuscData
`LandingData`	LandingData
`MergeAcoustic()`	Merge AcousticData
`MergeStoxAcoustic()`	Merge StoxAcousticData
`MergeStoxAcousticData`	StoX data type MergeStoxAcousticData
`MergeStoxBiotic()`	Merge StoxBioticData
`MergeStoxBioticData`	StoX data type MergeStoxBioticData
`ModelData`	Model data used by RstoxData
`PrepareNmdBioticTable()`	PrepareNmdBioticTable
`ProcessData`	Process data used by RstoxData
`ReadAcoustic()`	Read acoustic XML files
`ReadBiotic()`	Read biotic XML files
`ReadLanding()`	Read landing XML files
`RedefineStoxBiotic()`	Redefine StoxBioticData variables by data from BioticData
`RegroupLengthICESDatras()`	Regroup LngtCode and LngtClass ICESDatrasData
`RstoxData-package` `RstoxData`	Tools to Read and Manipulate Fisheries Data
`StoxAcoustic()`	Convert AcousticData to StoxAcousticData
`StoxAcousticData`	StoX data type StoxAcousticData
`StoxAcousticFormat`	StoxAcoustic data format.
`StoxBiotic()`	Convert BioticData to StoxBioticData
`StoxBioticData`	StoX data type StoxBioticData
`StoxBioticFormat`	StoxBiotic data format.
`StoxLanding()`	Convert landing data
`StoxLandingData`	StoxLandingData
`StoxUnits`	Stox units
`TranslateAcoustic()`	Translate AcousticData
`TranslateBiotic()`	Translate BioticData
`TranslateICESAcoustic()`	Translate ICESAcousticData
`TranslateICESBiotic()`	Translate ICESBioticData
`TranslateICESDatras()`	Translate ICESDatrasData
`TranslateICESDatsusc()`	Translate ICESDatsuscData
`TranslateLanding()`	Translate LandingData
`TranslateStoxAcoustic()`	Translate StoxAcousticData
`TranslateStoxBiotic()`	Translate StoxBioticData
`TranslateStoxLanding()`	Translate StoxLandingData
`Translation`	Translation definition (from file or from table).
`WriteAcoustic()`	Write Acoustic
`WriteBiotic()`	Write Biotic
`WriteICESAcoustic()`	Write ICESAcoustic to CSV fille
`WriteICESAcousticData`	Rbind `ICESAcousticData` to a string matrix.
`WriteICESBiotic()`	Write ICESBiotic to CSV fille
`WriteICESBioticData`	Rbind `ICESBioticData` to a string matrix.
`WriteICESDatras()`	Write ICESDatras to CSV fille
`WriteICESDatrasData`	Rbind `ICESDatrasData` to a string matrix.
`WriteICESDatsusc()`	Write ICESDatras to CSV fille
`WriteICESDatsuscData`	Rbind `ICESDatsuscData` to a string matrix.
`applyFunctionArgumentHierarchy()`	Function to return the names of the arguments to show for a function:
`backwardCompatibility_RstoxData`	Backward compabitibility actions:
`convertBioticFile()`	Converts biotic
`convertToLandingData()`	Convert landings
`convertToLssData()`	Convert landings
`copy_arguments`	Parameters used in Copy* functions in RstoxData
`createOrderKey()`	Convert a vector to an integer vector where individual string elements at interpreted as numeric if possible.
`do.call_robust()`	do.call which ignores non-relevant parameters
`ecosystemsurvey_example`	Data from Barents Sea NOR-RUS ecosystem cruise in autumn
`filterData()`	Run filter on any StoX related data source
`filterTables()`	Filter a set of tables with hierarchical relations
`findUnit()`	Look up unit
`firstClass()`	Get the first element returned by class(), and translate "double" to "numeric".
`generalSamplingHierarhcy`	General sampling hierarchy of StoX
`general_arguments`	General parameters of RstoxData.
`getNumberOfCores()`	Pick a suitable number of cores
`getRstoxDataDefinitions()`	Get RstoxData definitions
`getStoxKeys()`	Get the keys of a StoX format
`getUnit()`	Get unit for value
`getUnitOptions()`	Get available units
`hasUnit()`	Does the input have unit?
`is.LandingData()`	Check if argument is LandingData
`is.StoxLandingData()`	Check if argument is StoxLandingData
`lapplyOnCores()`	Run a function on all elements of x on one or more cores
`mapplyOnCores()`	Run a function on all elements of x on one or more cores
`match_arg_informative()`	Informative match.arg
`mergeByIntersect()`	Merge two data tables by the intersect of the names
`mergeByStoxKeys()`	Merge two data tables by StoX keys
`mergeDataTables()`	Merge list of data tables recursively
`oldToNewTranslationList()`	Function to convert from the VarialbeName-Value-NewValue translation form to the foor where variable names are column names.
`orderRowsByKeys()`	Order a StoX format by keys
`parseInterCatch()`	Parses InterCatch
`printErrorIDs()`	Paste to a linespace + tab separeted string
`processPropertyFormats`	Define the process property formats:
`readErsFile()`	Parses logbooks (ERS)
`readLssFile()`	Parses landings (sales notes)
`readXmlFile()`	Read fisheries XML data format file
`sanitizeExpression()`	Sanitize an expression given in a string
`setColumnClasses()`	Convert classes of a data.table:
`setUnit()`	Set units of value
`setorderv_numeric()`	Order a data.table (by reference) by interpreting characters as numeric if possible
`stoxBioticObject`	stoxBioticObject
`stoxFunctionAttributes`	Function specification for inclusion in StoX projects
`unMergeAcoustic()`	Un-merge MergeAcousticData
`unMergeBiotic()`	Un-merge MergeBioticData
`xsdObjects`	xsdObjects

Reference

All functions