Catch at Age result table — makeResultTableRECA • RstoxFDA

Produces common reported statistics for Catch-At-Age estimation.

Usage

makeResultTableRECA(
  prediction,
  unit = "millions",
  plusGroup = NULL,
  alpha = 0.05
)

Arguments

prediction: as returned by eca.predict or runRECA.
unit: unit of reported estimates. See details.
plusGroup: Fish this age or older will be grouped in report
alpha: value for percentiles.

Value

data.table() with columns:

age: Age statistics are reported for
total: Estimated total catch of age group
unit: Unit for total catch and standard deviation for estimated total
sd: Standard deviation for estimated total
cv: Coefficient of variation for estimated total
lowerQuantile: Lower quantile (100*alpha/2 percentile) for estimated total
UpperQuantile: Upper quantile: (100*(1-alpha/2) percentile) for estimated total
alpha: alpha for quantiles.

Details

parameter 'unit' supports:

number: Catch at age as number of fish
thousands: Catch at age as number of fish in thousands
millions: Catch at age as number of fish in millions
kg: Catch at age as mass in kilogrammes
T: Catch at age as mass in tons
kT: Catch at age as mass in kilotonnes

Examples

 data(recaPrediction)
 makeResultTableRECA(recaPrediction, plusGroup=13)
#>     age        total     unit upperQuantile lowerQuantile alpha
#>  1:   2   5.23740860 millions    7.55175127  3.366104e+00  0.05
#>  2:   3  62.89020409 millions   74.67054655  5.180856e+01  0.05
#>  3:   4 147.06215922 millions  158.91098719  1.354573e+02  0.05
#>  4:   5  48.71480282 millions   57.20106384  4.137034e+01  0.05
#>  5:   6  19.57404860 millions   23.28896437  1.620716e+01  0.05
#>  6:   7   6.91958273 millions    9.25782397  4.725750e+00  0.05
#>  7:   8   2.33974128 millions    3.53527429  1.251480e+00  0.05
#>  8:   9   1.58758079 millions    2.46972328  5.355693e-01  0.05
#>  9:  10   0.00000000 millions    0.00000000  0.000000e+00  0.05
#> 10:  11   0.14879672 millions    0.53504808  4.868518e-06  0.05
#> 11:  12   0.03552055 millions    0.10746717  0.000000e+00  0.05
#> 12: 13+   0.02368909 millions    0.08808582  4.384655e-05  0.05